Study Reveals An Enhanced Bacterial Defense Against Viral Infection

The study was published on April 16 in Nature Structural & Molecular Biology revealed that one key factor responsible for bacterial defense against viral infection is when phages invade bacteria and exploit their cellular mechanisms for replication. Recent advancements in technology have facilitated the identification of the proteins engaged in these defense mechanisms. However, researchers are still delving further into the functions of these proteins.

DateApril 26, 2024
SourceOhio State University
SummaryScientists document the molecular formation of a prevalent anti-phage system, belonging to the protein family known as Gabija, which is believed to be employed by approximately 8.5% to 18% of bacterial species worldwide.
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About Bacteriophages:

Bacteriophages are viruses composed of genetic material, either DNA or RNA, encased in a protein coat. They come in various shapes and sizes, ranging from simple structures to complex arrangements resembling lunar landers. Despite their diversity, all bacteriophages share a common mission: to infect bacterial cells and hijack their cellular machinery to replicate and produce more phages.

Experiment: Bacterial Defense Against Viral Infection

ResearchObservationConclusion
The components of this bacterial defense against viral infection are referred to as Gabija A and Gabija B, abbreviated as GajA and GajB, respectively.

Using cryo-electron microscopy, scientists employed a method to discern the biochemical architectures of GajA and GajB separately, as well as of a supramolecular complex termed GajAB. This complex arises when the two proteins combine, forming a cluster composed of four molecules from each protein.
Scientists observed that while one protein alone dictate the ability to repel a phage, its effectiveness significantly amplifies when it interacts with another protein. This combined complex exhibits remarkable proficiency in cleaving the genome of an invading phage, rendering it incapable of replication.Researchers hypothesize that the formation of the complex between the two proteins is essential for their involvement in phage prevention. However, they also suggest that one protein on its own possesses some anti-phage capabilities.
Experiment

Future Application of The Experiment:

Watch The Application of Bacteria Here

These discoveries of bacterial defense against viral infection contribute to our comprehension of microorganisms’ evolutionary tactics and hold potential for future biomedical applications, according to researchers.

If you want to read more such biology news: Why Fasting is Not Always Good for Your Health, Cell Membrane Damage Promotes Cellular Senescence.

Bacteria employ sophisticated defense mechanisms to combat viral infections. Recent research has unveiled intricate molecular assemblies, such as the Gabija protein complex, which play pivotal roles in bacterial defense against viral infection. Understanding these defense strategies enhances our grasp of microbial biology and may pave the way for innovative biomedical interventions in the future.

FAQ on Bacterial Defense Against Viral Infection:

1. What is the Gabija protein complex?

The Gabija protein complex is a molecular assembly found in bacteria that plays a key role in defending against viruses. It consists of two proteins, Gabija A and Gabija B, which work together to inhibit viral replication.

2. How does the Gabija complex work?

When Gabija A and Gabija B proteins combine, they form a potent defense complex. This complex can disrupt the viral genome, rendering the virus unable to replicate and propagate within the bacterial host.

3. Why is understanding bacterial defense important?

Understanding how bacteria defend against viral infections provides insights into fundamental biological processes. Moreover, this knowledge may inspire the development of novel strategies for combating bacterial infections and advancing biomedical research

Intermittent Fasting Provides Defense Against Liver Inflammation and Liver Cancer

Intermittent fasting provides defense against liver inflammation and liver cancer because an approved drug for these diseases can partially imitate the effects of intermittent fasting. Fatty liver disease frequently progresses to chronic liver inflammation and may result in liver cancer. Recent studies in mice demonstrate that intermittent fasting, following a 5:2 schedule, can effectively arrest this progression. This fasting regimen diminishes the incidence of liver cancer in mice already afflicted with liver inflammation.

DateMay 7, 2024
SourceGerman Cancer Research Center (Deutsches Krebsforschungszentrum, DKFZ)
SummaryResearchers have pinpointed two proteins within liver cells that collaborate to engender the protective benefits of fasting. Furthermore, an approved medication exhibits the capacity to emulate this effect to some extent.
Biology News: Intermittent Fasting Provides Defense Against Liver Inflammation and Liver Cancer

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About The Liver Diseases:

The most prevalent chronic liver condition is non-alcoholic fatty liver disease (NAFLD), which can have severe implications. If left unaddressed, NAFLD can progress to liver inflammation, known as metabolic dysfunction-associated steatohepatitis (MASH), liver cirrhosis, and potentially liver cancer. Fatty liver disease is predominantly perceived as a direct consequence of obesity.

Experiment: Intermittent Fasting Provides Defense Against Liver Inflammation and Liver Cancer

Watch Here: What does the liver do?

ExperimentObservationConclusion


The animals(mice) were provided with a diet high in both sugar and fat, resembling the typical Western diet.


One set of mice had unrestricted access to this diet. As anticipated, these mice experienced weight gain, increased body fat, and developed chronic liver inflammation.


During the exploration of various intermittent fasting regimens, it became evident that several factors such as the frequency and duration of fasting cycles, along with the timing of the fasting phase initiation, influence the safeguarding against liver inflammation.

On the other hand, the mice in the alternate group underwent a dietary regimen where they fasted for two days a week for 5:2, while being allowed to eat huge on the remaining days.

Despite consuming a high-calorie diet, these mice did not exhibit weight gain, displayed fewer indications of liver disease, and demonstrated reduced levels of biomarkers associated with liver damage.From this analysis, two key components driving the protective response to fasting were identified: the transcription factor PPARα and the enzyme PCK1. These molecular entities collaborate to enhance the breakdown of fatty acids and gluconeogenesis while impeding the accumulation of fats
Biology News: Intermittent Fasting Provides Defense Against Liver Inflammation and Liver Cancer

Role of Approved Drug:

The medication pemafibrate emulates the actions of PPARα within the cell. Is it possible for this substance to replicate the protective benefits of fasting as well? To address this inquiry, researchers conducted experiments in mice. Pemafibrate prompted certain beneficial metabolic alterations akin to those observed during 5:2 fasting so the researchers can say that the intermittent fasting provides defense against liver inflammation and liver cancer

Intermittent fasting provides defense against liver inflammation and liver cancer through controlled periods of fasting, the body undergoes metabolic shifts that contribute to the reduction of liver inflammation and the inhibition of cancerous growth.

FAQ on Intermittent Fasting Provides Defense Against Liver Inflammation and Liver Cancer:

1. What are PPARα and PCK1?

PPARα (Peroxisome Proliferator-Activated Receptor alpha) and PCK1 (Phosphoenolpyruvate Carboxykinase 1) are two important proteins found in the liver cells of both humans and animals.

2. What do PPARα and PCK1 do?

PPARα plays a crucial role in regulating the expression of genes involved in fatty acid breakdown and energy metabolism in the liver. It helps in the breakdown of fatty acids and promotes their utilization for energy production.
PCK1, on the other hand, is an enzyme involved in a process called gluconeogenesis, where new glucose is produced from non-carbohydrate sources like fats and proteins. It also plays a role in regulating blood sugar levels.

Scientists Detect Doubling in the Source of Cancer Cells | Biology News

Scientists Detect Doubling in the Source of Cancer Cells published in the May 3 edition of Science, uncover the malfunction that occurs when a cluster of molecules and enzymes initiates and controls the ‘cell cycle,’ the recurring sequence responsible for generating new cells from the genetic material within cells.

DateMay 2, 2024
SourceJohns Hopkins Medicine
SummaryBy experimenting with human breast and lung cells, researchers report they have mapped out a molecular pathway capable of enticing cells into a perilous journey of excessive genome duplication, a characteristic feature of cancerous cells.
Biology News: Scientists Detect Doubling in the Source of Cancer Cells

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About Cell Cycle and Cancer:

Cells reproduce in an orderly manner, beginning with generating a duplicate of their entire genome, then separating the genome copies, and lastly dividing the replicated DNA evenly between two “daughter” cells.

Human cells have 23 pairs of each chromosome – half from the mother and half from the father, including the sex chromosomes X and Y – for a total of 46, however, cancer cells are known to go through an intermediate state with double that amount (92 chromosomes). How this occurred was a mystery.

Cells that are stressed after copying the genome may go dormant, or senescent while scientists detect doubling in the source of cancer cells in their experiment.

The immune system sweeps out these latent cells once they are “recognized” as defective. However, the immune system cannot always eliminate the cells, especially as humans age. If left to meander in the body, aberrant cells can reproduce their genome, shuffle the chromosomes at the next division, and a cancerous tumor develops.

Visualize The Cell Division Here

Experiment: Scientists Detect Doubling in the Source of Cancer Cells

Sl. No.ExperimentObservationConclusion
1.For this recent investigation, the team meticulously analyzed numerous images capturing individual cells undergoing cell division. Utilizing luminous biosensors, the researchers labeled cellular enzymes known as cyclin-dependent kinases (CDKs), renowned for their regulatory role in the cell cycle.They observed that various CDKs became active at distinct stages throughout the cell cycle. Following exposure to environmental stressors—such as drugs impeding protein synthesis, UV radiation, or sudden changes in water pressure around cells (osmotic stress)—the researchers noted a decrease in the activity of CDK 4 and CDK 6.In the context of the stressed environment explored in this study, APC( anaphase-promoting complex) activation occurred before mitosis, contrary to its typical activation solely during mitosis.
2.Approximately 90% of breast and lung cells halt their progression through the cell cycle and enter a quiescent state upon exposure to environmental stressors.However, within their experimental cell population, not all cells entered this quiescent state.The research team observed that around 5% to 10% of breast and lung cells resumed the cell cycle, undergoing chromosome division once more.
Experiment: Scientists Detect Doubling in the Source of Cancer Cells

There is a possibility that a combination of drugs might induce certain cancer cells to undergo genome duplication twice, leading to the creation of heterogeneity that ultimately results in drug resistance because scientists detect doubling in the source of cancer cells.

1. Why breast and lung cells were used in this experiment

Human cells that line breast ducts and lung tissue divide at a faster rate than other cells in the body, providing more opportunities to observe the cell cycle.

2. What was the challenge of scientists?

A long-standing topic among cancer researchers is, that how do cancer cell genomes become so bad. Sergi Regot, Ph.D., is an associate professor of molecular biology and genetics at Johns Hopkins University School of Medicine said that their findings call into question their basic understanding of the cell cycle and force them to reconsider how it is regulated.

3. What are the prospect of this experiment?

The discoveries offer potential for the development of treatments aimed at disruptions in the cell cycle, which could potentially halt the proliferation of cancers and there might exist medications capable of inhibiting APC activation before mitosis, thereby preventing cancer cells from undergoing genome duplication twice and impeding the progression to tumor stage.

Researchers Create Artificial Cells Same As Living Cells | Biology News

Researchers create artificial cells and detail the processes they employ to manipulate DNA and proteins, the fundamental components of life, to fabricate cells that closely resemble those found in the human body. This pioneering achievement holds significant implications for advancements in regenerative medicine, drug delivery systems, and diagnostic technologies.

DateApril 23, 2024
SourceUniversity of North Carolina at Chapel Hill
SummaryScientists fabricate synthetic cells that emulate the behavior of living cells. Researchers employ inventive methodologies to construct operational cells, effectively closing the divide between synthetic and organic materials.
Biology News

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About The Cells:

Cells and tissues consist of proteins that collaborate to execute tasks and construct structures. Proteins play a crucial role in establishing the cellular framework known as the cytoskeleton. Without it, cells would be incapable of functioning. The cytoskeleton provides cells with flexibility, enabling them to adapt both in shape and response to their surroundings.

In a recent publication in Nature Chemistry, Ronit Freeman, along with her colleagues from UNC-Chapel Hill, delineate their process of manipulating DNA and proteins, the fundamental components of life, to fabricate cells that closely resemble those found in the human body. Researchers create artificial cells to pioneer the achievement, a breakthrough in the field, that holds promising implications for advancements in regenerative medicine, drug delivery systems, and diagnostic tools.

How Researchers Create Artificial Cells:

ResearchObservationConclusion
Using an innovative peptide-DNA technology, researchers create artificial cells with functional cytoskeletons capable of morphing and responding to their environment, all without relying on natural proteins.

By programming DNA sequences, they orchestrated the assembly of peptides, the basic building blocks of proteins, and repurposed genetic material to construct the cytoskeleton.


DNA typically doesn’t feature in a cytoskeleton. They reprogrammed DNA sequences to function as architectural elements, binding the peptides together.

Once immersed in water, these programmed structures took form.

This ability to manipulate DNA empowers scientists to design cells tailored to specific functions and fine-tune their responsiveness to external stimuli.

While synthetic cells lack the complexity of their natural counterparts, they offer greater predictability and resilience in harsh conditions, such as extreme temperatures.

Synthetic cells remained stable even at temperatures as high as 122 degrees Fahrenheit.



Research

Researchers create artificial cells By incorporating various peptide and DNA designs, these materials can be programmed to form fabrics or tissues, offering diverse applications across biotechnology and medicine. These advancements in synthetic cell technology hold transformative potential, revolutionizing various fields.

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FAQ:

1. What are living cells?

Living cells are the basic structural and functional units of all living organisms. They are the smallest entities that exhibit the characteristics of life, including growth, metabolism, response to stimuli, reproduction, and adaptation to their environment.

2. What are the main components of a living cell?

Living cells are composed of several main components, including the cell membrane, cytoplasm, organelles (such as the nucleus, mitochondria, endoplasmic reticulum, and Golgi apparatus), and genetic material (DNA or RNA).

3. What are artificial cells?

Artificial cells are synthetic structures designed to mimic the properties and functions of natural living cells. They are created in laboratories using various materials and techniques to replicate certain aspects of cellular behavior.

4. How are artificial cells made?

Artificial cells are constructed using a combination of biomaterials, such as lipids, polymers, and proteins, along with advanced techniques in bioengineering and nanotechnology. These materials are assembled to mimic the structure and function of natural cells.

Lemurs are Under Threat Because One Vulnerable Species Stalks Another

In the new paper published in Ecology and Evolution, researchers describe how they were observing small groups of critically endangered diademed sifaka lemurs at Betampona Strict Nature Reserve when the predator struck. That means Lemurs are under threat because one vulnerable species stalks another.

According to research conducted by Washington University in St. Louis and the University of Antananarivo in Madagascar, the complexity of this situation can increase notably when predation takes place in a habitat that is isolated or of poor quality.

DateApril 19, 2024
SourceWashington University in St. Louis
SummaryResearchers investigating critically endangered lemurs in Madagascar were faced with this challenging reality when they observed attacks on lemurs perpetrated by another vulnerable species known as a fosa.
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About Lemurs:

In the heart of Madagascar’s lush forests dwells a majestic creature, the diademed sifaka lemur (Propithecus diadema).

The diademed sifaka stands out among its lemur relatives with its distinctive black and white fur, reminiscent of a regal crown adorning its head. Their long limbs and slender bodies allow them to gracefully traverse the treetops with unparalleled agility. Their expressive amber-colored eyes seem to reflect the mysteries of the forest they call home.

Diademed sifakas are highly social animals, living in close-knit family groups led by a dominant male and female. Their diet primarily consists of leaves, fruits, flowers, and occasionally seeds, providing them with the essential nutrients needed to thrive in their forest habitat.

See The Picture of Lemur Here

About Fossas:

With sleek bodies and elongated tails, Fosas (also known as Fossas, Crytoprocta ferox) exhibit numerous feline characteristics. They excel in climbing and are often likened to miniature cougars, although they belong to the weasel family.

The fosa is classified as vulnerable by the International Union for Conservation of Nature and Natural Resources, facing a significant risk of extinction, much like nearly all of its lemur prey. Fossas also feed on other small creatures such as birds and rodents.

Fossas are adept hunters, employing stealth in their approach. Researchers have primarily deduced the dietary habits of fosas by analyzing bones and other remnants found in their excrement.

See The Picture of Fossa Here

Research News: One Vulnerable Species Stalks Another

ResearchObservationConclusion

Researchers were conducting their daily behavioral observations when they came across a very unusual sight, a predation attempt by a fossa, which is the biggest predator in Madagascar.

While there are other smaller carnivores in Madagascar, none possess the size necessary to prey on adult diademed sifakas, as they rank among the largest lemurs. The number of predators capable of such an act is quite limited.


They observed that a female diademed sifaka, which we were tracking following the initial attack, didn’t flee a great distance. Instead, she remained motionless and alert, keeping a watchful eye on the fosa.

Furthermore, the researchers recounted additional instances over a span of 19 months of observation when fosas seemed to stalk lemurs but were unsuccessful in capturing them as prey.
The combination of predation, low reproductive rates, and the possibility of high inbreeding within the lemur population at Betampona may significantly influence the species’ survival in this area.





Research

Through their research, they’ve been able to uncover issues such as inbreeding and other factors that likely contribute to the diademed sifaka population’s inability to thrive at Betampona, and Fossa too, needs conservation efforts because Lemurs are under threat when one vulnerable species stalks another.

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FAQ:

1. What is threatened or vulnerable species?

It indicates that it faces a high risk of becoming endangered in the foreseeable future if conservation measures are not implemented.

2. What is endangered species?

When a species is classified as “endangered,” it means that it is at a very high risk of becoming extinct in the wild if urgent conservation actions are not taken.

3. What is extinct species?

When a species is considered “extinct,” it means that there are no living individuals of that species remaining anywhere on Earth, or extinct species are those that have completely disappeared from the wild and no longer exist.

Specific Genomic Changes in the Monkeypox Virus Associated with Their Transmissibility

Collaborative efforts between Mount Sinai scientists and researchers from the Carlos III Health Institute (ISCIII) in Madrid, Spain, have successfully pinpointed and characterized specific modifications within the monkeypox virus genome. Specific genomic changes in the monkeypox virus associated with their transmissibility, virus potentially correspond to variations in the virus’s ability to spread, as observed during the outbreak in 2022. The findings of this research were recently published on April 18 in Nature Communications.

DateApril 19, 2024
SourceMount Sinai School of Medicine
SummaryResearchers have pinpointed and identified modifications within the genome of the monkeypox virus that may be linked to the observed alterations in the virus’s ability to spread during the 2022 outbreak.
Biology News

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What is Monkeypox Virus:

The Monkeypox virus (MPXV) is a type of double-stranded DNA virus capable of infecting both animals and humans. It leads to a condition called mpox, characterized by symptoms such as fever, swollen lymph nodes, and a rash.

While many cases of mpox are mild and resolve without intervention, the condition can be extremely painful and may result in permanent scarring.

See The Structure of Monkeypox Virus Here

Specific Genomic Changes in the Monkeypox Virus:

With increased circulation of the virus in humans, the risk of a more transmissible variant emerging and potentially becoming endemic in the human population grows.

Gustavo Palacios, PhD, a Professor of Microbiology at the Icahn School of Medicine at Mount Sinai and one of the study’s senior authors, emphasizes the importance of investigating transmission conditions when significant changes in the fundamental epidemiological characteristics of a viral pathogen such as monkeypox occur. He highlights the ongoing rise in cases in Africa and the 2022 epidemic as clear warning signals that warrant renewed attention in specific genomic changes in the monkeypox virus.

Research News:

ExperimentObservationConclusion
Researchers examined samples from 46 patients infected with MPXV, whose diagnosis and sequencing were conducted at the ISCIII during the onset of the 2022 mpox outbreak.

The team conducted comprehensive sequencing of each patient’s entire monkeypox virus genome to explore potential correlations between genomic variations across different sequence groups and epidemiological connections linked to the virus’s evolution, transmission, and infection.

The advanced complete genome sequencing utilized two sophisticated sequencing technologies: single-molecule long-read sequencing (to cover highly repetitive regions) and deep short sequencing reads (to ensure accuracy and depth).




The research team identified recurring genomic changes in regions of the genome possibly associated with viral adaptation.

These specific sites likely influence viral replication, adaptability, and routes of entry and exit.

These alterations are situated in regions termed low complexity genomic areas, which are challenging to sequence and analyze, explaining why they were previously overlooked.
By elucidating the genomic modifications within these repetitive sequences and their connection to vital viral functions, researchers offer a plausible explanation for the increased transmissibility observed during the 2022 mpox outbreak.
Experiment

Specific genomic changes in the monkeypox virus, emphasizes that gaining a deeper comprehension of the factors facilitating viral transmission and influencing clinical manifestations will pave the way for the development of more efficient prevention and treatment approaches.

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FAQ:

1. What is the history of the monkeypox virus?

Monkeypox virus (MPXV) was initially identified in 1958 among crab-eating macaque monkeys imported to Belgium. Since the 1970s, it has sporadically caused outbreaks of human disease in Central and Western Africa.

2. In which countries monkeypox virus found?

In May 2022, numerous countries, including the United States, reported a rise in MPXV infections and associated illnesses. This included clusters of cases potentially linked to super-spreading incidents in Belgium, Spain, and the United Kingdom.

3. What is the recent status of monkeypox virus?

Although the number of new cases related to the 2022 outbreak has declined over time, instances of the disease persist among unvaccinated individuals. Notably, there is currently an uptick in Central Africa due to a new spillover event.

Besides “Garbage Disposal” Why Proteasomes Are Necessary For Life

The cellular waste management system, formally known as autophagy, plays a vital role in maintaining cellular health and homeostasis. Within the bustling environment of a cell, autophagy serves as the cleanup crew, responsible for removing damaged or unwanted components to ensure the cell’s survival and functionality where proteasome perform an important role.

DateApril 12, 2024
SourceJohns Hopkins University School of Medicine
SummaryScientists studied nerve cells cultivated in laboratories and mice suggest that the proteasome’s role may extend far beyond its conventional cell cleaning functions.
Biology News

If you want to read recent biology news then click here: Cell Membrane Damage Promotes Cellular Senescence.

ExperimentObservationConclusion
Seth S. Margolis, Ph.D., associate professor of biological chemistry at the Johns Hopkins University School of Medicine, studying nerve cells grown in the lab and mice.Seth S. Margolis said “Neurons live next to each other for a long time, and they need ways to communicate with each other about what they’re doing and who they are.” Proteasomes located within the neuronal membrane could assist in refining this communication process within cells.
Experiment

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Cellular Waste Management System:

Just like a city needs efficient garbage disposal to keep its streets clean, cells have their own waste management system to ensure proper functioning. The cellular waste management system primarily revolves around a process called autophagy, which literally means “self-eating.” Autophagy is a highly regulated mechanism through which cells degrade and recycle their own components. It serves as a quality control mechanism, ensuring that damaged or unnecessary cellular components are removed and recycled.

Proteasome:

One of the key players in the cellular waste management system is the proteasome, often referred to as the cell’s garbage disposal. The proteasome is a large protein complex responsible for breaking down unwanted proteins into smaller fragments. These protein fragments are then recycled to generate new proteins or used as building blocks for other cellular processes.

See The Structure of Proteasome Here

Additional Functions of Proteasome:

The outcomes of their investigations, published on April 12, 2024 in Cell Reports, indicate that proteasomes might aid specialized neurons in detecting the surrounding environment, transmitting signals to one another, and potentially distinguishing between sensations of pain and itch. This discovery could offer insights into these sensory processes and identify novel targets for addressing pain and other sensory-related issues.

History of the Experiment:

“Proteasomes are more complicated and detailed than initially perceived,” states Margolis. He and his team initially discovered proteasomes within the plasma membranes of neurons in the central nervous system of mice in 2017, which they termed neuronal membrane proteasomes. Since then, they have been investigating how these specialized proteasomes facilitate communication, or crosstalk, among neurons.

Initially, Margolis focused on the central nervous system, which comprises the brain and spinal cord. However, he later collaborated with neurobiologist Eric Villalón Landeros, Ph.D., a postdoctoral fellow in Margolis’ laboratory at Johns Hopkins, whose research is centered on the peripheral nervous system. This network of neurons extends throughout the body, closer to the skin, and is responsible for capturing sensory information from the environment.

Together, Margolis and Villalon Landeros pondered whether proteasomes could also be present in peripheral neurons and, if so, what functions they might serve.

FAQs:

1. What are proteasomes?

These are large protein complexes found in cells that play a crucial role in degrading and recycling unwanted or damaged proteins.

2. How does it work?

It degrade proteins by breaking them down into smaller fragments. This process helps regulate protein levels within cells and removes proteins that are no longer needed or are damaged.

3. Where are it located in cells?

Proteasomes are found throughout the cytoplasm and nucleus of eukaryotic cells. They are also present in the peroxisomes and endoplasmic reticulum, where they perform specific functions.

Better View of Living Bacteria with New Mid-Infrared Nanoscopy

With the help of new mid-infrared nanoscopy, the chemical images captured of the interior of bacteria are 30 times sharper compared to those obtained using conventional mid-infrared microscopes.

Enhanced clarity in viewing samples at a smaller scale offers valuable support across various research domains, such as the study of infectious diseases, while also paving the path for the advancement of increasingly precise mid-infrared-based imaging technologies in the future.

DateApril 17, 2024
SourceUniversity of Tokyo
SummaryA team has developed an enhanced mid-infrared microscope, facilitating the observation of internal structures within living bacteria at the nanometer scale. This new mid-infrared nanoscopy generated images at a resolution of 120 nanometers, marking a thirtyfold enhancement compared to the resolution typically achieved by conventional mid-infrared microscopes, according to the researchers.
Biology News

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What is Mid-Infrared Nanoscopy:

  1. Mid-infrared nanoscopy, a cutting-edge imaging technique, enables scientists to visualize objects and structures at the nanometer scale, far beyond the limits of conventional optical microscopy.
  2. This breakthrough technology relies on the unique properties of mid-infrared light, which penetrates deeper into samples and interacts with molecular vibrations, providing rich biochemical information.
  3. One of the key advantages of mid-infrared nanoscopy is its exceptional spatial resolution. By leveraging advanced techniques such as synthetic aperture and apertureless scanning, researchers can achieve resolutions on the order of tens of nanometers, revealing details that were previously invisible.

See The Structure of Mid-Infrared Microscope Here

Research News:

ExperimentObservationConclusion
1. The team employed a method called “synthetic aperture,” which involves merging multiple images captured from different illuminated angles to produce a clearer composite image.
2. Typically, a sample is positioned between two lenses, yet these lenses inadvertently absorb some of the mid-infrared light.
3. To address this challenge, the researchers positioned the sample, consisting of bacteria (E. coli and Rhodococcus jostii RHA1 in this case), on a silicon plate capable of reflecting visible light while transmitting infrared light.
4. This approach permitted the use of a single lens, enhancing the illumination of the sample with mid-infrared light and resulting in a more detailed image.





Researchers observe the intracellular structures of bacteria with a remarkable clarity.The researchers achieved a spatial resolution of 120 nanometers, equivalent to 0.12 microns. This remarkable level of resolution represents an approximate thirtyfold improvement compared to conventional mid-infrared microscopy.
Experiment

Comparison of Mid-Infrared Nanoscopy with Other Microscopes:

Fluorescent MicroscopesElectron MicroscopesMid-Infrared Microscopes
Super-resolution fluorescent microscopes necessitate the labeling of specimens with fluorescence, a process that can occasionally pose toxicity risks to samples.
Prolonged light exposure during observation can also result in sample bleaching, rendering them unusable.
Similarly, electron microscopes offer exceptional detail; however, samples must be placed in a vacuum, prohibiting the study of live samples.In contrast, mid-infrared microscopy offers the advantage of providing both chemical and structural insights into live cells without the need for staining or causing damage to them.
Yet, its application in biological research has been constrained due to its relatively limited resolution capacity.
Comparison

Professor Takuro Ideguchi from the Institute for Photon Science and Technology at the University of Tokyo said that we are confident in our ability to further enhance the technique of mid-infrared nanoscopy in multiple aspects. By employing superior lenses and shorter wavelengths of visible light, we anticipate achieving spatial resolutions below 100 nanometers. With enhanced clarity, our aim is to investigate a diverse range of cell samples, addressing both fundamental and applied biomedical challenges.

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Why Green-to-Red Transformation of Euglena gracilis is in News

The green-to-red transformation of Euglena gracilis occurs when the organism is exposed to certain stimuli, such as intense red light and specific nutrient-rich mediums. This green-to-red transformation of Euglena gracilis is primarily attributed to changes in the production and accumulation of pigments within the cells, particularly carotenoids, which impart the distinctive red coloration.

DateApril 15, 2024
SourceTokyo University of Science
SummaryTransforming Euglena gracilis from green to red utilizing bonito source and intense crimson illumination.
Biology News

If you want to read recent biology news then read here: Cell Membrane Damage Promotes Cellular Senescence.

Euglena gracilis:

  • Euglena gracilis, a unicellular organism, found in freshwater environments worldwide, this single-celled marvel possesses characteristics that make it a subject of fascination for scientists and researchers alike.
  • Euglena gracilis appears as a tiny, elongated cell, typically ranging from 15 to 500 micrometers in length. Its distinctive feature is the presence of a flagellum, a whip-like appendage that propels it through water, enabling it to move with remarkable agility.
  • Contained within its cell is a specialized organelle called a chloroplast, which contains chlorophyll—a pigment crucial for capturing light energy.
  • Despite its microscopic size, Euglena gracilis packs a nutritional punch. This unicellular organism is rich in protein, containing all essential amino acids, making it a complete protein source comparable to animal products.
  • Additionally, Euglena gracilis is a good source of vitamins, including vitamin A, vitamin C, and various B vitamins, essential for overall health and well-being.
  • It also contains Omega-3 fatty acids and antioxidant properties.

See The Structure of Euglena gracilis Here

Factors of Green-to-Red Transformation of Euglena gracilis:

  • Researchers have identified several factors that influence the green-to-red transformation of Euglena gracilis. Intense red light within specific wavelengths triggers a series of biochemical reactions within the cells, leading to the synthesis and accumulation of carotenoids, including astaxanthin and β-carotene.
  • Additionally, the composition of the culture medium plays a crucial role green-to-red transformation of Euglena gracilis, with nutrient-rich mediums, such as those derived from bonito stock or tomato juice, providing the necessary resources for enhanced pigment production.

Study:

In a research paper released in 2023, a team of researchers from TUS unveiled an approach to effectively cultivate E. gracilis in a cost-effective medium, whether solid or liquid, derived from tomato juice, commonly utilized for bacterial growth. Now, in a subsequent investigation, the scientists have delved into a promising methodology to enhance the production of carotenoids in cultured E. gracilis, elevating its nutritional value.

Research Team:

This study of green-to-red transformation of Euglena gracilis was Co-authored by Dr. Kengo Suzuki from Euglena Co., Ltd., alongside Professor Tatsuya Tomo and Professor Eiji Tokunaga from TUS, this latest study was featured in Volume 13, Issue 4 of the Plants journal, released on February 12, 2024.

Research News:

ExperimentObservationConclusion
The team conducted a series of experiments on numerous batches of cultured E. gracilis. They subjected the cultures to varying wavelengths (or colors) and intensities of light to observe a “reddening reaction,” a distinctive indicator of increased carotenoid production observed in numerous plant species.

Additionally, they explored a novel culture medium derived from bonito stock, a soup base extracted from Katsuobushi, a traditional Japanese dish crafted from smoked bonito fish.
The research team discovered that intense red-light exposure within the range of 605-660 nm induced a reddening response in E. gracilis cultivated in bonito stock.

Additionally, they analyzed the chemical compositions of the cultures using high-performance liquid chromatography, examining both the culture as a whole and individual cells.
These investigations conclded that red-hued cells not only exhibited a substantial concentration of diadinoxanthin, the predominant carotenoid in E. gracilis, but also synthesized an unidentified xanthophyll-type carotenoid.

Furthermore, the team observed that cultures cultivated in bonito stock displayed accelerated growth and achieved greater densities compared to those grown on standard media, potentially resulting in increased diversity or quantities of carotenoids.
Experiment

The findings of this research on the green-to-red transformation of Euglena gracilis hold the potential to lay the groundwork for a novel and readily scalable method for cultivating nutrient-rich E. gracilis.

If you want to read more such biology news like green-to-red transformation of Euglena gracilis then read these news: How Jellyfish Can Remember Everything Without The Central Brain, Now Paralysis Can Be Recovered By The Grace Of New Research, Why The Spread of Viruses is Increasing Now.

Why The Spread of Viruses is Increasing Now

The spread of viruses is the grand theater of life, viruses are the elusive, enigmatic actors that play a role both captivating and ominous. These microscopic entities, neither truly alive nor entirely inanimate, hold the power to spark pandemics and pave the way for breakthroughs in science. As we embark on this journey to explore the intricate world of virus transmission, we’ll unravel the secrets of their spread, from the microscopic realms to the global stage. It’s a story of tiny agents that have shaken the world in ways both profound and unprecedented. Welcome to the fascinating and often unsettling realm of virus dissemination.

The Interrelation of Spread of Viruses

But how do environmental changes, loss of biodiversity, and the spread of viruses relate to each other? The scientists from Charité — Universitätsmedizin Berlin have unveiled the answer in their recent publication in the eLife journal. Their research reveals that the destruction of tropical rainforests has a detrimental impact on the diversity of mosquito species, and simultaneously, it leads to the proliferation of more resilient mosquito species, which, in turn, results in an increase in the abundance of the viruses they carry. When a particular mosquito species becomes highly populous, the associated viruses can spread rapidly.

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What is Biodiversity

Biodiversity is not merely a scientific concept; it’s the life force that sustains our planet. It’s the irreplaceable treasure chest of nature’s wonders, awaiting discovery and protection. As we learn to appreciate the depth and complexity of biodiversity, we awaken to the responsibility of safeguarding it for generations to come. The symphony of life plays on, and we, as caretakers of this planet, must ensure that every note continues to resonate in harmony.

The Types of Biodiversity

1. Ecosystem Diversity: Biodiversity encompasses the kaleidoscope of ecosystems on Earth. From lush rainforests to arid deserts, each ecosystem hosts its unique cast of characters. Coral reefs teem with colorful marine life, while the tundra shelters hardy Arctic creatures. These ecosystems are the stages upon which life’s drama unfolds.

2. Species Diversity: At the heart of biodiversity lies the staggering variety of species—plants, animals, fungi, and microorganisms. Think of the bumblebee that pollinates flowers, the giant panda that feasts on bamboo, or the microscopic bacteria that cycle nutrients in soil. Each species has its role in the grand narrative of life.

3. Genetic Diversity: Within each species, genetic diversity weaves a tapestry of adaptation and resilience. It’s the reason why some cheetahs can sprint faster than others or why certain crops thrive in diverse climates. Genetic diversity is the orchestra’s score, allowing life to adapt to changing circumstances.

Why Biodiversity Matters

1. Ecosystem Services: Biodiversity provides us with an array of ecosystem services essential for survival. Forests purify our air, wetlands filter our water, and bees pollinate our crops. These services are the silent engines that drive our planet’s health.

2. Medicine and Innovation: Nature’s treasure trove of chemical compounds and genetic secrets has gifted us with life-saving medicines and technological innovations. From aspirin derived from willow bark to the potential cancer cures found in deep-sea sponges, biodiversity is a wellspring of inspiration for science.

3. Cultural and Spiritual Value: Biodiversity infuses culture and spirituality. It forms the backdrop of art, folklore, and indigenous wisdom. It inspires awe, wonder, and a deep sense of interconnectedness with the natural world.

Threats to Biodiversity

Despite its importance, biodiversity is under siege:

  1. Habitat Loss: Urbanization, deforestation, and agriculture have destroyed habitats at an alarming rate, displacing countless species.
  2. Climate Change: Rising temperatures and altered weather patterns are disrupting ecosystems and pushing species to their limits.
  3. Pollution: Toxins from chemicals, plastics, and pollutants contaminate ecosystems, harming species and their habitats.
  4. Overexploitation: Unsustainable hunting, fishing, and logging practices are driving many species to the brink of extinction.

The Perils of Biodiversity Loss

Sadly, biodiversity faces a relentless onslaught of threats:

1. Habitat Destruction: Urbanization, deforestation, and agriculture bulldoze ecosystems, displacing countless species.

2. Climate Change: Rising temperatures alter ecosystems, pushing species to adapt or migrate. Some may not survive.

3. Pollution: Toxins from chemicals and plastics suffocate habitats and harm species.

4. Overexploitation: Unsustainable hunting, fishing, and logging practices drive species towards extinction.

Preserving the Biodiversity

  1. Protected Areas: Establishing and maintaining national parks and wildlife reserves offer sanctuaries for endangered species.
  2. Conservation Efforts: Conservationists work tirelessly to save threatened species through breeding programs and habitat restoration.
  3. Sustainable Practices: Sustainable agriculture, responsible forestry, and eco-friendly fishing practices aim to reduce humanity’s impact on biodiversity.
  4. Education and Advocacy: Raising awareness about the importance of biodiversity fosters a sense of responsibility and encourages sustainable practices.

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The Collaboration of The Study

In collaboration with the Leibniz Institute for Zoo and Wildlife Research (IZW), Charité researchers embarked on a study that delves into the effects of rainforest clearance for purposes like coffee or cacao plantations and human settlements on the prevalence and biodiversity of mosquitoes and the viruses they harbor. This interdisciplinary research, which combines virology and biodiversity studies, was spearheaded by Prof. Sandra Junglen, who leads the Ecology and Evolution of Arboviruses research group at Charité’s Institute of Virology.

How They Study The Spread of Viruses

To conduct their study, the team initially captured mosquitoes in the vicinity of Taï National Park in Côte d’Ivoire, West Africa, where a wide spectrum of land uses exists, ranging from pristine rainforests to secondary forests, cacao and coffee plantations, and human settlements. Kyra Hermanns, the study’s first author from the Institute of Virology at Charité, elucidates their methodology: “We identified the mosquito species we captured and subjected them to tests for viral infections. Subsequently, we examined how the composition of mosquito species varied across different land use types, the presence of specific viruses, and their prevalence.”

What They Obtained From The Study of Spread of Viruses

In a healthy ecosystem, such as an untouched rainforest, a plethora of viruses exists due to the diverse array of animal species acting as carriers or hosts for these viruses. Viruses are intricately linked to their host species. Consequently, any alterations in the ecosystem directly affect the viruses. Junglen elucidates: “We identified 49 distinct virus species, with the highest diversity of hosts and viruses found in undisturbed or minimally disrupted habitats.” Most of these 49 virus species were relatively scarce in the areas under study. However, nine of them were frequently detected across various habitats, with their prevalence increasing notably in disturbed environments, particularly in human settlements.

The Conclusion of The Study

This implies that the clearance of tropical rainforests results in a decline in mosquito species diversity, thereby altering the composition of host species. Some hardy mosquito species thrive exceptionally well in these cleared areas, bringing along the viruses they carry. The composition of a particular species community consequently has a direct impact on virus prevalence: “When one host species becomes exceedingly abundant, viruses find it easier to spread,” notes the virologist. “All the viruses that exhibited increased prevalence were linked to specific mosquito species. These viruses belong to different families and possess distinct properties. This means that the spread of viruses is not primarily due to genetic relatedness but is influenced by the characteristics of their hosts, particularly mosquito species that can adapt effectively to changing environmental conditions in disrupted habitats.”

Specification of Spread of Viruses

The viruses discovered in the study only infect mosquitoes and are currently not transmissible to humans. Nevertheless, they serve as a valuable model for comprehending how changes in species diversity within a community affect the presence and prevalence of viruses. Junglen emphasizes the significance of biodiversity: “Our study underscores the vital role of biodiversity and highlights that reducing biodiversity facilitates the thriving of specific viruses by increasing the abundance of their hosts.”

Differences Between The Past and Present Study

In the past, such processes were predominantly studied using individual pathogens and their respective hosts. However, this research provides a more comprehensive perspective that can be further explored. The researchers intend to extend their investigations to diverse habitats in other countries in their upcoming work, with the aim of pinpointing the precise factors that influence the diversity of mosquito species in response to land-use changes and the characteristics that viruses require to spread alongside their hosts.”